Index

_

_add_element() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) _check_atomic_fraction() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _check_weight_fraction() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _compute_atomic_fraction_elements() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _compute_berger() (in module casinotools.file_format.casino2.mean_ionization_potential) _compute_depth_range() (in module casinotools.file_format.casino2.simulation_results) _compute_j() (in module casinotools.file_format.casino3.element) _compute_joy() (in module casinotools.file_format.casino2.mean_ionization_potential) _compute_mean_atomic_number() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _compute_mean_mass_density_g_cm3() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _compute_number_elements() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _compute_ph() (in module casinotools.file_format.casino2.mean_ionization_potential) _export_color() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_header() (casinotools.file_format.casino3.sample.Sample method) _export_name() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_region_data() (casinotools.file_format.casino3.sample.Sample method) _export_region_name() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_rotation() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_sample_data() (casinotools.file_format.casino3.sample.Sample method) _export_sample_objects() (casinotools.file_format.casino3.sample.Sample method) _export_scale() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_substrate() (casinotools.file_format.casino3.sample.Sample method) _export_translation() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_type() (casinotools.file_format.casino3.sample_object.SampleObject method) _export_version() (casinotools.file_format.casino3.sample.Sample method) (casinotools.file_format.casino3.sample_object.SampleObject method) _extract_option_simulation_data() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile static method) _extractDataLabelLineDataElement() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _extractDataLabelLineDataElementLine() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _extractHeaderLineDataElement() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _extractHeaderLineDataElementLine() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _extractValueLineData() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _generate_name() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) _is_collision_data_line() (casinotools.file_format.casino3.exported.trajectories.ExportedTrajectories static method) _is_git_lfs_file() (in module casinotools.utilities.path) _is_simulation_filepath() (casinotools.file_format.casino2.file.File static method) _is_type() (casinotools.file_format.casino3.trajectory.Trajectory method) _isDataLabelLine() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _isHeaderLine() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method)

_isValueLine() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _limited_stream_search() (in module casinotools.file_format.tags) _modify() (casinotools.file_format.casino3.element.Element method) (casinotools.file_format.casino3.region.Region method) _outer() (in module casinotools.utilities.multiple_loop) _read() (in module casinotools.file_format.file_reader_writer_tools) _read_3131() (casinotools.file_format.casino3.sample.Sample method) _read_backscattered_angle() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_backscattered_energy() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_backscattered_energy_t() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_bse_angle_energie() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_bse_intensity() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_collision_data_line() (casinotools.file_format.casino3.exported.trajectories.ExportedTrajectories static method) _read_data_file() (casinotools.file_format.casino3.exported.trajectories.ExportedTrajectories method) _read_deposited_energy() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_dncr() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_float_list_without_loop_fast() (in module casinotools.file_format.file_reader_writer_tools) _read_header() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_header_fast() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_int_list_without_loop_fast() (in module casinotools.file_format.file_reader_writer_tools) _read_maximum_depth() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_number_scattering_events() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_number_scattering_events_fast() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_optimized() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) _read_original() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) _read_region_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) _read_scattering_events() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_scattering_events_optimized() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_scattering_events_original() (casinotools.file_format.casino3.trajectory.Trajectory method) _read_simulation_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) _read_simulation_results() (casinotools.file_format.casino2.simulation_data.SimulationData method) _read_str_length() (in module casinotools.file_format.file_reader_writer_tools) _read_surface_radius_bse() (casinotools.file_format.casino2.simulation_results.SimulationResults method) _read_trajectories() (casinotools.file_format.casino2.simulation_data.SimulationData method) _read_values() (casinotools.file_format.casino3.graph_data.GraphData method) (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) _remove_all_elements() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) _run() (in module casinotools.file_format.casino2.file) _search_tag() (in module casinotools.file_format.tags) _setTextFileVersion() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) _stream_search_position_fast() (in module casinotools.file_format.tags) _write() (in module casinotools.file_format.file_reader_writer_tools) _write_region_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) _write_simulation_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) _write_simulation_results() (casinotools.file_format.casino2.simulation_data.SimulationData method) _write_str_length() (in module casinotools.file_format.file_reader_writer_tools) _write_trajectories() (casinotools.file_format.casino2.simulation_data.SimulationData method)

A

add() (casinotools.file_format.casino2.graph_data.GraphData method) add_data() (casinotools.file_format.casino2.xray_radial.XrayRadial method) add_element() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) add_elements() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method)

add_position() (casinotools.file_format.casino3.scan_point_positions.ScanPointPositions method) add_region() (casinotools.file_format.casino3.sample.Sample method) add_sample_object() (casinotools.file_format.casino3.sample.Sample method) add_sample_object_with_id() (casinotools.file_format.casino3.sample.Sample method) add_tag() (in module casinotools.file_format.tags) add_tag_old() (in module casinotools.file_format.tags)

B

BoxShape (class in casinotools.file_format.casino3.sample_object_factory)

C

casinotools module casinotools.analyse module casinotools.file_format module casinotools.file_format.casino2 module casinotools.file_format.casino2.composition module casinotools.file_format.casino2.element module casinotools.file_format.casino2.element_intensity module casinotools.file_format.casino2.file module casinotools.file_format.casino2.generate_sim_file module casinotools.file_format.casino2.graph_data module casinotools.file_format.casino2.line module casinotools.file_format.casino2.mean_ionization_potential module casinotools.file_format.casino2.region module casinotools.file_format.casino2.region_options module casinotools.file_format.casino2.scattering_event module casinotools.file_format.casino2.simulation_data module casinotools.file_format.casino2.simulation_options module casinotools.file_format.casino2.simulation_results module casinotools.file_format.casino2.trajectories_data module casinotools.file_format.casino2.trajectory module casinotools.file_format.casino2.version module casinotools.file_format.casino2.xray_radial module casinotools.file_format.casino2.xray_radial_reader module casinotools.file_format.casino3 module casinotools.file_format.casino3.element module casinotools.file_format.casino3.exported module casinotools.file_format.casino3.exported.trajectories module casinotools.file_format.casino3.graph_data module casinotools.file_format.casino3.models module casinotools.file_format.casino3.options_adf module casinotools.file_format.casino3.options_adv_back_set module casinotools.file_format.casino3.options_advanced_psfs_settings module casinotools.file_format.casino3.options_dist module casinotools.file_format.casino3.options_energy_by_pos module casinotools.file_format.casino3.options_micro module

casinotools.file_format.casino3.options_physic module casinotools.file_format.casino3.options_xray module casinotools.file_format.casino3.point_spread_function_matrix module casinotools.file_format.casino3.region module casinotools.file_format.casino3.region_intensity_info module casinotools.file_format.casino3.region_options module casinotools.file_format.casino3.sample module casinotools.file_format.casino3.sample_object module casinotools.file_format.casino3.sample_object_factory module casinotools.file_format.casino3.sample_reader module casinotools.file_format.casino3.sample_shape module casinotools.file_format.casino3.sample_shape.shape_type module casinotools.file_format.casino3.sample_shape.sphere_shape module casinotools.file_format.casino3.sample_substrate module casinotools.file_format.casino3.sample_tree module casinotools.file_format.casino3.scan_point_positions module casinotools.file_format.casino3.scan_points module casinotools.file_format.casino3.simulation_options module casinotools.file_format.casino3.trajectory module casinotools.file_format.casino3.trajectory_collision module casinotools.file_format.casino3.triangle module casinotools.file_format.casino3.vector module casinotools.file_format.casino3.version module casinotools.file_format.file_reader_writer_tools module casinotools.file_format.tags module casinotools.utilities module casinotools.utilities.multiple_loop module casinotools.utilities.path module check_and_correct_value_size() (in module casinotools.file_format.file_reader_writer_tools) combine() (in module casinotools.utilities.multiple_loop) Composition (class in casinotools.file_format.casino2.composition) compute_j() (casinotools.file_format.casino2.mean_ionization_potential.MeanIonizationPotential method) (in module casinotools.file_format.casino2.element) compute_k() (in module casinotools.file_format.casino2.element) (in module casinotools.file_format.casino3.element) ConeShape (class in casinotools.file_format.casino3.sample_object_factory) create_object_from_type() (in module casinotools.file_format.casino3.sample_object_factory) create_path() (in module casinotools.utilities.path) create_tag_with_filler() (in module casinotools.file_format.tags) CrossSection (class in casinotools.file_format.casino3.options_physic) CylindreShape (class in casinotools.file_format.casino3.sample_object_factory)

D

delete_all_trajectory_collisions() (casinotools.file_format.casino3.trajectory.Trajectory method)

E

Edge (class in casinotools.file_format.casino3.sample_substrate) Element (class in casinotools.file_format.casino2.element) (class in casinotools.file_format.casino3.element) ElementIntensity (class in casinotools.file_format.casino2.element_intensity) ELSEPA (casinotools.file_format.casino3.options_physic.CrossSection attribute) export() (casinotools.file_format.casino3.region.Region method) (casinotools.file_format.casino3.sample.Sample method) (casinotools.file_format.casino3.sample_object.SampleObject method) (casinotools.file_format.casino3.sample_substrate.SampleSubstrate method) (casinotools.file_format.casino3.sample_tree.SampleTree method) (casinotools.file_format.casino3.scan_point_positions.ScanPointPositions method) (casinotools.file_format.casino3.simulation_options.SimulationOptions method) (casinotools.file_format.casino3.triangle.Triangle method)

ExportedTrajectories (class in casinotools.file_format.casino3.exported.trajectories) extract_boolean_string() (in module casinotools.file_format.file_reader_writer_tools) extract_version() (casinotools.file_format.casino2.file.File method) extract_version_string() (in module casinotools.file_format.file_reader_writer_tools)

F

File (class in casinotools.file_format.casino2.file) find_all_files() (in module casinotools.utilities.path)

find_tag() (in module casinotools.file_format.tags) find_tag_position() (in module casinotools.file_format.tags)

G

GenerateSimFile (class in casinotools.file_format.casino2.generate_sim_file) get_atom() (in module casinotools.file_format.casino2.element) (in module casinotools.file_format.casino3.element) get_atomic_fraction() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_atomic_number() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_atomic_weight_g_mol() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_backscattered_angle_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_backscattered_energy_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_backscattered_maximum_depth_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_backscattered_maximum_depth_range() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_beam_angle_deg() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_bse_coefficient() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_collision_type() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_collision_type_name() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_composition() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) (casinotools.file_format.casino3.region.Region method) get_current_module_path() (in module casinotools) (in module casinotools.utilities.path) get_data() (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) get_data_labels() (casinotools.file_format.casino2.xray_radial.XrayRadial method) get_deposited_energy_center_nm() (casinotools.file_format.casino3.options_dist.OptionsDist method) get_deposited_energy_size_nm() (casinotools.file_format.casino3.options_dist.OptionsDist method) get_depth_xray_distribution() (casinotools.file_format.casino2.element.Element method) get_depth_xray_distribution_by_line_type() (casinotools.file_format.casino2.element.Element method) get_depth_xray_distribution_layer() (casinotools.file_format.casino2.element.Element method) get_depth_xray_distribution_layer_by_line_type() (casinotools.file_format.casino2.element.Element method) get_direction_cosines() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_direction_cosines_string() (in module casinotools.file_format.casino2.simulation_options) get_distances_nm() (casinotools.file_format.casino2.xray_radial.XrayRadial method) get_elastic_cross_section_type_string() (in module casinotools.file_format.casino2.simulation_options) get_electron_elastic_cross_section_model_label() (in module casinotools.file_format.casino3.options_physic) get_element() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) get_element_by_symbol() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) get_element_symbol() (casinotools.file_format.casino2.xray_radial.XrayRadial method) get_elements() (casinotools.file_format.casino2.region.Region method) get_energy_absorbed_keV() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_energy_intensity() (casinotools.file_format.casino3.region_intensity_info.RegionIntensityInfo method) get_energy_keV() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_energy_loss_string() (in module casinotools.file_format.casino2.simulation_options) get_energy_loss_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_first_sphere_shape() (casinotools.file_format.casino3.sample.Sample method) get_id() (casinotools.file_format.casino3.region.Region method) get_incident_energy_keV() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_intensities() (casinotools.file_format.casino2.xray_radial.XrayRadial method) get_intensities_absorbed() (casinotools.file_format.casino2.xray_radial.XrayRadial method) get_ionization_cross_section_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_ionization_cross_section_type_string() (in module casinotools.file_format.casino2.simulation_options) get_ionization_potential_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_ionization_potential_type_string() (in module casinotools.file_format.casino2.simulation_options) get_line() (casinotools.file_format.casino2.xray_radial.XrayRadial method) get_line_scan_parameters() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_mass_density_g_cm3() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_maximum_depth_nm() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_maximum_energy_absorbed_keV() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_maximum_lateral_width() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_mean_atomic_number() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) get_mean_mass_density_g_cm3() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) get_name() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) (casinotools.file_format.casino3.sample_object.SampleObject method) get_normalized_energy_intensity() (casinotools.file_format.casino3.region_intensity_info.RegionIntensityInfo method) get_number_electrons() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_number_elements() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) get_number_points() (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) (casinotools.file_format.casino3.scan_point_positions.ScanPointPositions method) get_number_points_energy_absorbed() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_number_points_energy_absorbed_x() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_number_points_energy_absorbed_y() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_number_points_energy_absorbed_z() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_number_points_x() (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) get_number_points_y() (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) get_number_points_z() (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) get_number_regions() (casinotools.file_format.casino2.region_options.RegionOptions method) get_number_scattering_events() (casinotools.file_format.casino3.trajectory.Trajectory method)

get_number_simulations() (casinotools.file_format.casino2.file.File method) get_number_steps_x() (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) get_number_steps_y() (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) get_number_steps_z() (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) get_number_x_ray_layers() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_option_simulation_data() (casinotools.file_format.casino2.file.File method) (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) get_options_advanced_psfs_settings() (casinotools.file_format.casino3.simulation_options.SimulationOptions method) get_options_distributions() (casinotools.file_format.casino3.simulation_options.SimulationOptions method) get_parameters() (casinotools.file_format.casino2.region.Region method) get_partial_electron_elastic_cross_section() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_plane_shapes() (casinotools.file_format.casino3.sample.Sample method) get_position_nm() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_positions() (casinotools.file_format.casino2.graph_data.GraphData method) (casinotools.file_format.casino3.scan_point_positions.ScanPointPositions method) get_positions_at_z_nm() (casinotools.file_format.casino3.exported.trajectories.ExportedTrajectories method) get_psf_center_nm() (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) get_radial_xray_distribution() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_radius_xy_nm() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_random_number_generator_string() (in module casinotools.file_format.casino2.simulation_options) get_random_number_generator_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_region() (casinotools.file_format.casino2.region_options.RegionOptions method) (casinotools.file_format.casino3.region_options.RegionOptions method) get_region_id() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_region_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) get_regions() (casinotools.file_format.casino2.region_options.RegionOptions method) (casinotools.file_format.casino3.sample.Sample method) get_repetition() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_results_first_simulation() (casinotools.file_format.casino2.file.File method) get_results_simulation() (casinotools.file_format.casino2.file.File method) get_rotation_y_deg() (casinotools.file_format.casino3.sample.Sample method) get_rotation_z_deg() (casinotools.file_format.casino3.sample.Sample method) get_sample() (casinotools.file_format.casino3.sample_reader.SampleReader method) get_scale_nm() (casinotools.file_format.casino3.sample_object.SampleObject method) get_scan_point_position_nm() (casinotools.file_format.casino3.exported.trajectories.ExportedTrajectories method) get_scattering_event() (casinotools.file_format.casino3.trajectory.Trajectory method) get_scattering_events() (casinotools.file_format.casino2.trajectory.Trajectory method) (casinotools.file_format.casino3.trajectory.Trajectory method) get_scattering_events_by_type() (casinotools.file_format.casino3.trajectory.Trajectory method) get_shapes() (casinotools.file_format.casino3.sample.Sample method) get_simulation_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) get_simulation_results() (casinotools.file_format.casino2.simulation_data.SimulationData method) get_size_of_double_list() (in module casinotools.file_format.file_reader_writer_tools) get_size_of_int_list() (in module casinotools.file_format.file_reader_writer_tools) get_size_scattering_event() (in module casinotools.file_format.casino3.trajectory_collision) get_skip_offset() (casinotools.file_format.casino2.scattering_event.ScatteringEvent static method) get_string() (in module casinotools.file_format.casino3.sample_shape.shape_type) get_surface_radius_bse_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_symbol() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_toa_deg() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_total_electron_elastic_cross_section() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) get_total_xray_intensities() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino2.simulation_data.SimulationData method) (casinotools.file_format.casino3.element.Element method) get_total_xray_intensities_1_esr() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino2.simulation_data.SimulationData method) get_total_xray_intensity_by_line_type() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_trajectories() (casinotools.file_format.casino2.trajectories_data.TrajectoriesData method) get_trajectories_data() (casinotools.file_format.casino2.simulation_data.SimulationData method) get_translation_nm() (casinotools.file_format.casino3.sample_object.SampleObject method) get_transmitted_energy_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) get_type() (casinotools.file_format.casino3.sample_object.SampleObject method) (casinotools.file_format.casino3.trajectory.Trajectory method) get_type_name() (casinotools.file_format.casino3.trajectory.Trajectory method) get_use_scan_point_for_center() (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) get_values() (casinotools.file_format.casino2.graph_data.GraphData method) (casinotools.file_format.casino3.graph_data.GraphData method) get_version() (casinotools.file_format.casino2.simulation_data.SimulationData method) (casinotools.file_format.casino3.sample.Sample method) (casinotools.file_format.casino3.sample_object.SampleObject method) (casinotools.file_format.casino3.trajectory.Trajectory method) get_weight_fraction() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) get_x_nm() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_y_nm() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) get_z_nm() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) getData() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) getDataLabels() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) GraphData (class in casinotools.file_format.casino2.graph_data) (class in casinotools.file_format.casino3.graph_data)

I

index2pos() (casinotools.file_format.casino2.graph_data.GraphData method) (in module casinotools.file_format.casino3.graph_data) is_absorbed() (casinotools.file_format.casino2.trajectory.Trajectory method) is_backscattered() (casinotools.file_format.casino2.trajectory.Trajectory method) is_backscattered_angle_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) is_backscattered_energy_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) is_backscattered_maximum_depth_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) is_bad_file() (in module casinotools.utilities.path) is_generating_psfs() (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) is_git_lfs_file() (in module casinotools.utilities.path) is_interpolation() (casinotools.file_format.casino3.options_physic.OptionsPhysic method) is_monsel_settings() (casinotools.file_format.casino3.options_physic.OptionsPhysic method)

is_surface_radius_bse_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) is_transmitted() (casinotools.file_format.casino2.trajectory.Trajectory method) is_transmitted_energy_distribution() (casinotools.file_format.casino2.simulation_results.SimulationResults method) is_type_backscattered() (casinotools.file_format.casino3.trajectory.Trajectory method) is_type_detected() (casinotools.file_format.casino3.trajectory.Trajectory method) is_type_displayed() (casinotools.file_format.casino3.trajectory.Trajectory method) is_type_none() (casinotools.file_format.casino3.trajectory.Trajectory method) is_type_secondary() (casinotools.file_format.casino3.trajectory.Trajectory method) is_type_transmitted() (casinotools.file_format.casino3.trajectory.Trajectory method) is_user_mass_density() (casinotools.file_format.casino2.region.Region method) is_version_casino2() (in module casinotools.file_format.casino2.version) is_version_casino3() (in module casinotools.file_format.casino3.version)

L

limited_search_tag() (in module casinotools.file_format.tags)

M

MeanIonizationPotential (class in casinotools.file_format.casino2.mean_ionization_potential) MeshObject (class in casinotools.file_format.casino3.sample_object_factory) modify() (casinotools.file_format.casino3.options_micro.OptionsMicro method) (casinotools.file_format.casino3.options_physic.OptionsPhysic method) (casinotools.file_format.casino3.sample_object.SampleObject method) modify_name() (casinotools.file_format.casino3.region.Region method) modify_position_z() (casinotools.file_format.casino3.sample_object.SampleObject method) modify_rotation_y_deg() (casinotools.file_format.casino3.sample.Sample method) modify_rotation_z_deg() (casinotools.file_format.casino3.sample.Sample method) module casinotools casinotools.analyse casinotools.file_format casinotools.file_format.casino2 casinotools.file_format.casino2.composition casinotools.file_format.casino2.element casinotools.file_format.casino2.element_intensity casinotools.file_format.casino2.file casinotools.file_format.casino2.generate_sim_file casinotools.file_format.casino2.graph_data casinotools.file_format.casino2.line casinotools.file_format.casino2.mean_ionization_potential casinotools.file_format.casino2.region casinotools.file_format.casino2.region_options casinotools.file_format.casino2.scattering_event casinotools.file_format.casino2.simulation_data casinotools.file_format.casino2.simulation_options casinotools.file_format.casino2.simulation_results casinotools.file_format.casino2.trajectories_data casinotools.file_format.casino2.trajectory casinotools.file_format.casino2.version casinotools.file_format.casino2.xray_radial casinotools.file_format.casino2.xray_radial_reader casinotools.file_format.casino3 casinotools.file_format.casino3.element casinotools.file_format.casino3.exported casinotools.file_format.casino3.exported.trajectories casinotools.file_format.casino3.graph_data casinotools.file_format.casino3.models casinotools.file_format.casino3.options_adf casinotools.file_format.casino3.options_adv_back_set casinotools.file_format.casino3.options_advanced_psfs_settings casinotools.file_format.casino3.options_dist casinotools.file_format.casino3.options_energy_by_pos casinotools.file_format.casino3.options_micro casinotools.file_format.casino3.options_physic casinotools.file_format.casino3.options_xray casinotools.file_format.casino3.point_spread_function_matrix casinotools.file_format.casino3.region casinotools.file_format.casino3.region_intensity_info casinotools.file_format.casino3.region_options casinotools.file_format.casino3.sample casinotools.file_format.casino3.sample_object casinotools.file_format.casino3.sample_object_factory casinotools.file_format.casino3.sample_reader casinotools.file_format.casino3.sample_shape casinotools.file_format.casino3.sample_shape.shape_type casinotools.file_format.casino3.sample_shape.sphere_shape casinotools.file_format.casino3.sample_substrate casinotools.file_format.casino3.sample_tree casinotools.file_format.casino3.scan_point_positions casinotools.file_format.casino3.scan_points casinotools.file_format.casino3.simulation_options casinotools.file_format.casino3.trajectory casinotools.file_format.casino3.trajectory_collision casinotools.file_format.casino3.triangle casinotools.file_format.casino3.vector casinotools.file_format.casino3.version casinotools.file_format.file_reader_writer_tools casinotools.file_format.tags casinotools.utilities casinotools.utilities.multiple_loop casinotools.utilities.path

MOTT_BROWNING (casinotools.file_format.casino3.options_physic.CrossSection attribute) MOTT_DROUIN (casinotools.file_format.casino3.options_physic.CrossSection attribute) MOTT_FILE (casinotools.file_format.casino3.options_physic.CrossSection attribute)

O

OptionsADF (class in casinotools.file_format.casino3.options_adf) OptionsAdvancedPsfsSettings (class in casinotools.file_format.casino3.options_advanced_psfs_settings) OptionsAdvBackSet (class in casinotools.file_format.casino3.options_adv_back_set) OptionsDist (class in casinotools.file_format.casino3.options_dist)

OptionsEnergyByPos (class in casinotools.file_format.casino3.options_energy_by_pos) OptionsMicro (class in casinotools.file_format.casino3.options_micro) OptionsPhysic (class in casinotools.file_format.casino3.options_physic) OptionsXray (class in casinotools.file_format.casino3.options_xray)

P

PlaneShape (class in casinotools.file_format.casino3.sample_object_factory)

PointSpreadFunctionMatrix (class in casinotools.file_format.casino3.point_spread_function_matrix)

R

read() (casinotools.file_format.casino2.composition.Composition method) (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino2.element_intensity.ElementIntensity method) (casinotools.file_format.casino2.graph_data.GraphData method) (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino2.region_options.RegionOptions method) (casinotools.file_format.casino2.scattering_event.ScatteringEvent method) (casinotools.file_format.casino2.simulation_data.SimulationData method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) (casinotools.file_format.casino2.simulation_results.SimulationResults method) (casinotools.file_format.casino2.trajectories_data.TrajectoriesData method) (casinotools.file_format.casino2.trajectory.Trajectory method) (casinotools.file_format.casino3.element.Element method) (casinotools.file_format.casino3.graph_data.GraphData method) (casinotools.file_format.casino3.options_adf.OptionsADF method) (casinotools.file_format.casino3.options_adv_back_set.OptionsAdvBackSet method) (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) (casinotools.file_format.casino3.options_dist.OptionsDist method) (casinotools.file_format.casino3.options_energy_by_pos.OptionsEnergyByPos method) (casinotools.file_format.casino3.options_micro.OptionsMicro method) (casinotools.file_format.casino3.options_physic.OptionsPhysic method) (casinotools.file_format.casino3.options_xray.OptionsXray method) (casinotools.file_format.casino3.point_spread_function_matrix.PointSpreadFunctionMatrix method) (casinotools.file_format.casino3.region.Region method) (casinotools.file_format.casino3.region_intensity_info.RegionIntensityInfo method) (casinotools.file_format.casino3.region_options.RegionOptions method) (casinotools.file_format.casino3.sample.Sample method) (casinotools.file_format.casino3.sample_object.SampleObject method) (casinotools.file_format.casino3.sample_object_factory.ConeShape method) (casinotools.file_format.casino3.sample_object_factory.CylindreShape method) (casinotools.file_format.casino3.sample_object_factory.MeshObject method) (casinotools.file_format.casino3.sample_object_factory.PlaneShape method) (casinotools.file_format.casino3.sample_object_factory.RoundedRectangleShape method) (casinotools.file_format.casino3.sample_object_factory.TruncatedPyramidShape method) (casinotools.file_format.casino3.sample_reader.SampleReader method) (casinotools.file_format.casino3.sample_shape.sphere_shape.SphereShape method) (casinotools.file_format.casino3.sample_substrate.Edge method) (casinotools.file_format.casino3.sample_substrate.SampleSubstrate method) (casinotools.file_format.casino3.sample_tree.SampleTree method) (casinotools.file_format.casino3.scan_point_positions.ScanPointPositions method) (casinotools.file_format.casino3.simulation_options.SimulationOptions method) (casinotools.file_format.casino3.trajectory.Trajectory method) (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) (casinotools.file_format.casino3.triangle.Triangle method)

read_bool() (in module casinotools.file_format.file_reader_writer_tools) read_double() (in module casinotools.file_format.file_reader_writer_tools) read_double_list() (in module casinotools.file_format.file_reader_writer_tools) read_double_list_with_loop() (in module casinotools.file_format.file_reader_writer_tools) read_double_list_without_loop() (in module casinotools.file_format.file_reader_writer_tools) read_double_list_without_loop_fast() (in module casinotools.file_format.file_reader_writer_tools) read_float() (in module casinotools.file_format.file_reader_writer_tools) read_float_list() (in module casinotools.file_format.file_reader_writer_tools) read_from_file_object() (casinotools.file_format.casino2.file.File method) read_from_filepath() (casinotools.file_format.casino2.file.File method) read_int() (in module casinotools.file_format.file_reader_writer_tools) read_int_list() (in module casinotools.file_format.file_reader_writer_tools) read_long() (in module casinotools.file_format.file_reader_writer_tools) read_multiple_values() (in module casinotools.file_format.file_reader_writer_tools) read_str() (in module casinotools.file_format.file_reader_writer_tools) readTextFile() (casinotools.file_format.casino2.xray_radial_reader.XrayRadialReader method) Region (class in casinotools.file_format.casino2.region) (class in casinotools.file_format.casino3.region) RegionIntensityInfo (class in casinotools.file_format.casino3.region_intensity_info) RegionOptions (class in casinotools.file_format.casino2.region_options) (class in casinotools.file_format.casino3.region_options) REIMER (casinotools.file_format.casino3.options_physic.CrossSection attribute) remove_all_elements() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method) reset() (casinotools.file_format.casino3.options_adf.OptionsADF method) (casinotools.file_format.casino3.options_adv_back_set.OptionsAdvBackSet method) (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) (casinotools.file_format.casino3.options_dist.OptionsDist method) (casinotools.file_format.casino3.options_energy_by_pos.OptionsEnergyByPos method) (casinotools.file_format.casino3.options_micro.OptionsMicro method) (casinotools.file_format.casino3.options_physic.OptionsPhysic method) (casinotools.file_format.casino3.options_xray.OptionsXray method) (casinotools.file_format.casino3.scan_point_positions.ScanPointPositions method) RoundedRectangleShape (class in casinotools.file_format.casino3.sample_object_factory) run_profile() (in module casinotools.file_format.casino2.file) run_profile2() (in module casinotools.file_format.casino2.file) RUTHERFORD (casinotools.file_format.casino3.options_physic.CrossSection attribute)

S

Sample (class in casinotools.file_format.casino3.sample) SampleObject (class in casinotools.file_format.casino3.sample_object) SampleReader (class in casinotools.file_format.casino3.sample_reader) SampleSubstrate (class in casinotools.file_format.casino3.sample_substrate) SampleTree (class in casinotools.file_format.casino3.sample_tree) save() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) ScanPointPositions (class in casinotools.file_format.casino3.scan_point_positions) ScatteringEvent (class in casinotools.file_format.casino2.scattering_event) set_atomic_fraction() (casinotools.file_format.casino2.composition.Composition method) (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) set_beam_angle_deg() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_direction_cosines() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_division() (casinotools.file_format.casino3.sample_shape.sphere_shape.SphereShape method) set_elastic_cross_section_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_electron_elastic_cross_section() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) set_element() (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino2.region_options.RegionOptions method) (casinotools.file_format.casino3.element.Element method) set_element_symbol() (casinotools.file_format.casino2.xray_radial.XrayRadial method) set_energy_loss_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_film_thickness() (casinotools.file_format.casino2.region_options.RegionOptions method) set_film_thickness_in_substrate() (casinotools.file_format.casino2.region_options.RegionOptions method) set_incident_energy_keV() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_index() (casinotools.file_format.casino2.composition.Composition method) set_ionization_cross_section() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) set_ionization_cross_section_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_ionization_potential() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) set_ionization_potential_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_labels() (casinotools.file_format.casino2.xray_radial.XrayRadial method) set_line() (casinotools.file_format.casino2.xray_radial.XrayRadial method) set_linescan_parameters() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_number_electrons() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_option_simulation_data() (casinotools.file_format.casino2.file.File method) set_parameters() (casinotools.file_format.casino2.region.Region method) set_partial_electron_elastic_cross_section() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_position() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_radius_nm() (casinotools.file_format.casino3.sample_shape.sphere_shape.SphereShape method) set_random_number_generator_type() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_regions_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) set_rotation_y_deg() (casinotools.file_format.casino3.sample.Sample method) set_rotation_z_deg() (casinotools.file_format.casino3.sample.Sample method) set_simulation_options() (casinotools.file_format.casino2.simulation_data.SimulationData method) set_thin_film_thickness() (casinotools.file_format.casino2.region_options.RegionOptions method) set_to_monsel_settings() (casinotools.file_format.casino3.options_physic.OptionsPhysic method) set_toa_deg() (casinotools.file_format.casino2.generate_sim_file.GenerateSimFile method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_total_electron_elastic_cross_section() (casinotools.file_format.casino2.simulation_options.SimulationOptions method) set_total_thickness_nm() (casinotools.file_format.casino2.simulation_options.SimulationOptions method)

set_values() (casinotools.file_format.casino3.trajectory_collision.TrajectoryCollision method) set_weight_fraction() (casinotools.file_format.casino2.composition.Composition method) (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino3.element.Element method) ShapeError SIM_OPTIONS_VERSION_3_1_2_2 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_2_5 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_3_1 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_3_40 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_3_5 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_3_70 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_3_9 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_0 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_3 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_4 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_5 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_6 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_60 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_7 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_71 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_72 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_73 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_74 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_80 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_4_96 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_1 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_10 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_12 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_20 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_21 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_22 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_4 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_5_5 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_7_0 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_7_1 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_7_2 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_7_3 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_8_1 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_8_2 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1_9_0 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_1__ (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_2_0_0 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_2_0_1 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_2_0_2 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_2_0_3 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_3_0_0 (in module casinotools.file_format.casino3.version) SIM_OPTIONS_VERSION_3_3_0_4 (in module casinotools.file_format.casino3.version) SimulationData (class in casinotools.file_format.casino2.simulation_data) SimulationOptions (class in casinotools.file_format.casino2.simulation_options) (class in casinotools.file_format.casino3.simulation_options) SimulationResults (class in casinotools.file_format.casino2.simulation_results) SphereShape (class in casinotools.file_format.casino3.sample_shape.sphere_shape) stream_search_fast() (in module casinotools.file_format.tags) stream_search_slow() (in module casinotools.file_format.tags)

T

TrajectoriesData (class in casinotools.file_format.casino2.trajectories_data) Trajectory (class in casinotools.file_format.casino2.trajectory) (class in casinotools.file_format.casino3.trajectory)

TrajectoryCollision (class in casinotools.file_format.casino3.trajectory_collision) Triangle (class in casinotools.file_format.casino3.triangle) TruncatedPyramidShape (class in casinotools.file_format.casino3.sample_object_factory)

U

update() (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino3.region.Region method)

V

Vector (class in casinotools.file_format.casino3.vector)

Version (class in casinotools.file_format.casino2.version)

W

write() (casinotools.file_format.casino2.composition.Composition method) (casinotools.file_format.casino2.element.Element method) (casinotools.file_format.casino2.file.File method) (casinotools.file_format.casino2.region.Region method) (casinotools.file_format.casino2.region_options.RegionOptions method) (casinotools.file_format.casino2.simulation_data.SimulationData method) (casinotools.file_format.casino2.simulation_options.SimulationOptions method) (casinotools.file_format.casino3.element.Element method) (casinotools.file_format.casino3.options_adf.OptionsADF method) (casinotools.file_format.casino3.options_adv_back_set.OptionsAdvBackSet method) (casinotools.file_format.casino3.options_advanced_psfs_settings.OptionsAdvancedPsfsSettings method) (casinotools.file_format.casino3.options_dist.OptionsDist method) (casinotools.file_format.casino3.options_energy_by_pos.OptionsEnergyByPos method) (casinotools.file_format.casino3.options_micro.OptionsMicro method) (casinotools.file_format.casino3.options_physic.OptionsPhysic method) (casinotools.file_format.casino3.options_xray.OptionsXray method) (casinotools.file_format.casino3.region.Region method) (casinotools.file_format.casino3.region_options.RegionOptions method) (casinotools.file_format.casino3.sample.Sample method) (casinotools.file_format.casino3.simulation_options.SimulationOptions method)

write_bool() (in module casinotools.file_format.file_reader_writer_tools) write_double() (in module casinotools.file_format.file_reader_writer_tools) write_double_list() (in module casinotools.file_format.file_reader_writer_tools) write_double_list_with_loop() (in module casinotools.file_format.file_reader_writer_tools) write_double_list_without_loop() (in module casinotools.file_format.file_reader_writer_tools) write_float() (in module casinotools.file_format.file_reader_writer_tools) write_float_list() (in module casinotools.file_format.file_reader_writer_tools) write_int() (in module casinotools.file_format.file_reader_writer_tools) write_int_list() (in module casinotools.file_format.file_reader_writer_tools) write_line() (in module casinotools.file_format.file_reader_writer_tools) write_long() (in module casinotools.file_format.file_reader_writer_tools) write_str() (in module casinotools.file_format.file_reader_writer_tools)

X

XrayRadial (class in casinotools.file_format.casino2.xray_radial)

XrayRadialReader (class in casinotools.file_format.casino2.xray_radial_reader)